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Table 1 T. californica electric organ proteome shows tissue-specific proteins when compared to mouse skeletal muscle proteome

From: Integrated genomics and proteomics of the Torpedo californica electric organ: concordance with the mammalian neuromuscular junction

Unique to skeletal muscle proteome

Unique to electric organ proteome

Development (myogenesis):

Myofibrillar:

UN45B

Cytoskeleton, actin M-band

Myofibrillar:

ANK1

Cytoskeleton, actin

Light chain part of A-band

TITIN

MYL9

Z-disk

Neuromuscular junction (NMJ):

ACTN2

ACES

ACTN3

ACHA

MYOTI

ACHB

PP2BA

ACHD

Class II myosins (A-band)

ACHG

MYBPH

DTNA

MYH1

HSP70

MYH3

HSP90B

MYH4

RAPSN

MYH6

NMJ-ECM

MYH7

LAMA2

MYH8

LAMB2

MYPC2

LAMC1

Light chain part of A-band

Cytoskeleton:

MYL1

Cytoskeleton, actin

M-band

SEPT6

MYOM1

sept7

OBSCN

ACTG

Contraction

ADDG

PHKG1

ACTC

MYLK2

ANK2

TNNC2

ARPC2

TNNI2

ARPC4

TNNT3

CCDC6

TPM2

COF1

ACTN4

COF2

Cytoskeleton:

DNJC7

Cytoskeleton, actin

FERM2

ACTS

PROF2

ML12B

SLMAP

MLRS

TCPA

MLRV

TLN2

Actin capping-binding

Actin capping-binding

CAPZB

CAZA2

RADI

SPTB1

XIRP1

Cytoskeleton, microtubule

Cytoskeleton, microtubule

DYN1

CLIP1

SIRT2

KINH

TBB1

PBIP1

TBB2

STIM1

TBB5

TBB2A

Intermediate filaments

TBB2C

K1C9

Sarcoplasmic reticulum/calcium pathways:

K1H1

AT2A2

NFH

AT2A3

NFL

CALU

NFM

JPH2

Sarcoplasmic reticulum/calcium pathways:

SRCA

SORCN

CASQ1

Ion channels:

CASQ2

Chloride channel

KPB1

CICH

Ion channels:

Calcium ATPase

Voltage-sensitive calcium channels

AT2B1

CA2D1

AT8A1

CAC1S

Hydrogen-potassium ATPase

CACB1

AT12A

Potassium channel

AT1A

TM38A

Sodium-potassium ATPase

Sodium-potassium ATPase

AT1A3

AT1A2

AT1B1

AT1B2

Extracellular matrix (ECM):

Oxygenation (muscle):

NID2

MYG

FINC

ECM:

CO1A1

CO6A1

CO1A2

COEA1

CO6A3

ITB1

BGH3

NID1

HPLN1

PEPD

Neuronal:

PGS2

AINX

Neurogenesis:

VAMP3

NDKA

 

NDRG2

 
  1. Proteins on the × and y axis of Figure 6, indicating unique identification in the corresponding tissue, were listed based on biological process, molecular function, and cellular localization. See Additional File 1 for expanded names of all abbreviated proteins.