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Table 6 Genes used to predict candidate miRNAs

From: A role for RNA post-transcriptional regulation in satellite cell activation

Probe set ID

Gene symbol

Entrez gene

Fold change

1417654_at

Sdc4

20971

11.68

1418282_x_at

Serpina1b

20701

6.78

1418510_s_at

Fbxo8

50753

4.74

1419070_at

Cys1

12879

3.78

1419302_at

Heyl

56198

3.26

1420930_s_at

Ctnnal1

54366

2.71

1420980_at

Pak1

18479

3.13

1422889_at

Pcdh18

73173

4.72

1422892_s_at

H2-Ea

14968

25.61

1424559_at

Rpap2

231571

5.15

1425336_x_at

H2-K1

14972

34.35

1425609_at

Ncf1

17969

2.68

1426981_at

Pcsk6

18553

3.38

1427884_at

Col3a1

12825

12.29

1429021_at

Epha4

13838

3.51

1430764_at

1700023F06Rik

69441

3.12

1433639_at

5730593F17Rik

215512

3.30

1434105_at

Epm2aip1

77781

2.91

1434267_at

Nek1

18004

2.90

1434790_a_at

Lta4h

16993

4.96

1435603_at

Sned1

208777

3.12

1437152_at

Mex3b

108797

4.08

1438532_at

Hmcn1

545370

6.09

1438577_at

---

---

5.66

1439618_at

Pde10a

23984

3.37

1440237_at

Ercc4

50505

3.40

1441958_s_at

Ager

11596

7.06

1442700_at

Pde4b

18578

11.21

1444409_at

Rph3al

380714

3.92

1444517_at

---

---

3.13

1447257_at

---

---

2.45

1447657_s_at

Synpo2l

68760

3.00

1449226_at

Hic1

15248

3.11

1449465_at

Reln

19699

5.95

1449619_s_at

Arhgap9

216445

3.20

1451513_x_at

Serpina1a

20700

4.62

1452632_at

Aak1

269774

3.64

1452896_at

Gtl3

14894

8.40

1453114_at

Nol9

74035

2.30

1453771_at

Gulp1

70676

5.06

1454112_a_at

Cep27

66296

2.46

1454433_at

6330526H18Rik

76174

2.95

1454877_at

Sertad4

214791

6.96

1455136_at

Atp1a2

98660

6.60

1455188_at

Ephb1

270190

3.37

1457944_at

---

---

16.23

1459164_at

AU014678

101228

2.34

  1. The relative expression data for genes that significantly change (ANOVA P ≤ 0.01, ≥ two-fold change) in wild type satellite cells isolated from uninjured TA muscle or from the TA 48 h post-muscle injury and not in Sdc4−/− satellite cells (ANOVA P > 0.9) is represented as a log2 values. Gene identifiers are Probe set ID, representative gene symbol, and entrez gene ID. The fold change was calculated for changes occurring in the first 12 h post-muscle injury according to genotype.