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Table 2 The oligonucleotide primers used for cloning the nebulin super repeats and for in vitro mutagenesis

From: Nebulin interactions with actin and tropomyosin are altered by disease-causing mutations

 

Primer name

5′-3′ Sequence

Experimental use

1

Ex 54-F

CGC GAA TTC CAA GGC TAC CGA AAG CAA

cDNA amplification

2

Ex 54-R

CCG CTC GAG ATC GCT CTG GAG GTC ATA GGC

cDNA amplification

3

Ex 78-F2

TAC GGA TCC AAG TAC AAG GAA GGC TAC CG

cDNA amplification

4

Ex 78-R1

TTT CTC GAG TGC TTG GAT AAT GTC GTT TTG

cDNA amplification

5

Ex 122-F1

GCG GGA TCC GAG AAG CAG AAA GGT CAC TAC

cDNA amplification

6

Ex 122-R

CCG CTC GAG GAT GTT AAG CTT GCC AAC TCG

cDNA amplification

7

Ex 151-F

CGC GAA TTC AAA TTG GAA TAC AAC AAG GCC

cDNA amplification

8

Ex 151-R

CCG CTC GAG TTT GGC TGC CTG TGT GGC

cDNA amplification

9

Ex 54MUT-F

GATGGAGTCCCTTGGGTTCTTTAAAGGCAGAAAAGAAC

In vitro mutagenesis

10

Ex 54MUT-R

GTTCTTTTCTGCCTTTAAAGAACCCAAGGGACTCCATC

In vitro mutagenesis

11

Ex 78DEL-F

CATTACCGACACTCCGGAAATTGCCCTGACAATGAGCAAG

In vitro mutagenesis

12

Ex 78DEL-R

CTTGCTCATTGTCAGGGCAATTTCCGGAGTGTCGGTAATG

In vitro mutagenesis

13

Ex 122MUT-F

ACTGCTGTTCAGAGTGGCATTAATGCCATTGAGGTAAAATATAA

In vitro mutagenesis

14

Ex 122MUT R

TTATATTTTACCTCAATGGCATTAATGCCACTCTGAACAGCAGT

In vitro mutagenesis

15

Ex 151MUT-F

TTCACGTCAAGGAAGTGCCCAAGCATGTCAGTGAT

In vitro mutagenesis

16

Ex 151MUT R

ATCACTGACATGCTTGGGCACTTCCTTGACGTGAA

In vitro mutagenesis

17

Ex 78DEL-F

CATTACCGACACTCCGGAAATTGCCCTGACAATGAGCAAG

In vitro mutagenesis

18

Ex 78DEL-R

CTTGCTCATTGTCAGGGCAATTTCCGGAGTGTCGGTAATG

In vitro mutagenesis