Figure 6
From: SMASH – semi-automatic muscle analysis using segmentation of histology: a MATLAB application
Fiber type. (A) Input box with options for fiber type function. (B) Truncated example of Excel output from running fiber type function. (C) Portion of immunofluorescent image. Red is laminin stain, green is slow muscle myosin heavy chain, and blue is DAPI (top left). Image showing negative fibers in gray and positive fibers in white (top right). Histogram of average fiber intensity for fiber type stain with threshold value (bottom left). Histogram of fiber CSA with positive fiber in red and all fibers in blue (bottom right).