Table 2 List of events involving alternative splice sites
From: The complexity of titin splicing pattern in human adult skeletal muscles
Donor | Acceptor | #Samples | #Reads | Frame | HSF consensus value novel donor splice site (value for wt) | HSF consensus value novel acceptor splice site (value for wt) | #Reads encode |
|---|---|---|---|---|---|---|---|
c.669 (ex5) | c.673 (ex6-alt acc) | 31 | 1195 | Yes | – | 78.86 (85.41) | 287 |
c.1398 (ex8) | c.1399–3 (int8-alt acc) | 42 | 6992 | Yes | – | 73.1 (80.21) | 4456 |
c.9471 (ex40) | c.9508 (ex41-alt acc) | 19 | 10,437 | Yes | – | 76.95 (90.97) | 101 |
c.22528 (ex78) | c.22871 (ex80-alt acc) | 27 | 1287 | Yes | – | Unpredicted (77.00) | 198 |
c.29124 (ex102-alt don) | c.29228 (ex103-alt acc) | 31 | 3807 | No | Unpredicted (88.47) | 72.03 (79.27) | 20 |
c.30754 (ex113) | c.30757 (ex114-alt acc) | 16 | 1537 | No | – | 72.87 (85.71) | 15 |
c.31426 (ex118) | c.31433 (ex119-alt acc) | 31 | 4960 | Yes | – | 79.99 (81.96) | 35 |
c.31762 (ex122) | c.31769 (ex123-alt acc) | 19 | 3455 | Yes | – | 86.28 (67.88) | 33 |
c.32197 (ex127) | c.32207 (ex128-alt acc) | 25 | 1018 | Yes | – | 82.28 (78.21) | 44 |
c.32392 (ex129) | c.32399 (ex130-alt acc) | 41 | 5055 | Yes | – | 82.29 (75.58) | 121 |
c.33910 (ex145) | c.33917 (ex146-alt acc) | 18 | 1733 | Yes | – | 80.36 (77.55) | 25 |
c.33994 (ex146) | c.34301 (ex148-alt acc) | 19 | 12,820 | Yes | – | 72.21 (73.01) | 159 |
c.38058 (ex191-alt don) | c.39484 (ex208-alt acc) | 37 | 1038 | Yes | Unpredicted (76.37) | 74.68 (80.08) | 32 |
c.38058 (ex191-alt don) | c.38980 (ex202-alt acc) | 37 | 1427 | Yes | Unpredicted (76.37) | 75.98 (77.27) | 26 |
c.39063 (ex203-alt don) | c.39484 (ex208-alt acc) | 35 | 2300 | Yes | Unpredicted (77.92) | 74.68 (80.08) | 29 |
c.39147 (ex204-alt don) | c.39484 (ex208-alt acc) | 41 | 4744 | Yes | Unpredicted (76.37) | 74.68 (80.08) | 105 |
c.40786 (ex223) | c.40790 (ex224 - alt acc) | 30 | 1518 | Yes | – | 75.32 (94.42) | 257 |
c.40876 (ex224) | c.40880 (ex225 - alt acc) | 24 | 1635 | Yes | – | 77.2 (91.6) | 151 |
c.44646 (ex243-alt don) | c.44914 (ex245) | 20 | 10,706 | No | 83.39 (82.15) | – | 15 |