From: MyoSight—semi-automated image analysis of skeletal muscle cross sections
MyoSight | MuscleJ | Open-CSAM | MyoVision | SMASH | |
---|---|---|---|---|---|
Compatibility | PC/Mac | PC/Mac | PC/Mac | PC Only | PC Only |
Platform | FIJI | FIJI | FIJI | Open Source | MATLAB |
Image type | Original format/TIFF | Original format/TIFF | TIFF | TIFF | TIFF |
Auto/semi-automated | Semi-automated | Automated | Semi-automated | Automated | Semi-automated |
Manual corrections | + | − | + | − | + |
Re-analysis with new analysis parameters | + | − | − | − | + |
CSA measurements | + | + | + | + | + |
Identifies fiber-types | + | + | − | + | + |
Identifies perinuclei | + | + | − | + | − |
Identifies central nuclei | + | + | − | − | + |
Identifies satellite cells | − | + | − | − | − |
Identifies vessels | − | + | − | − | − |
Accepts Z-stacks | − | + | − | − | − |
Number of channels | 5 | 4 | 1 | 5 | 3 |
Result files automatically generated | + | + | − | + | + |
Output of analyses performed | + | + | − | − | + |