Table 1 Top 50 SNPs in a genotypic model
From: Sarcoglycan A mutation in miniature dachshund dogs causes limb-girdle muscular dystrophy 2D
CHR | SNP | A1 | A2 | AFF | UNAFF | P |
|---|---|---|---|---|---|---|
9 | 9:25951885 | C | T | 9/0/0 | 0/8/10 | 2.134e−07 |
9 | 9:25983462 | C | G | 9/0/0 | 0/7/11 | 2.134e−07 |
9 | 9:26288724 | C | T | 9/0/0 | 0/6/12 | 2.134e−07 |
9 | 9:26292362 | G | A | 9/0/0 | 0/6/12 | 2.134e−07 |
9 | 9:26334051 | A | G | 9/0/0 | 0/6/12 | 2.134e−07 |
9 | 9:26345821 | T | C | 9/0/0 | 0/7/11 | 2.134e−07 |
9 | 9:26347986 | C | T | 9/0/0 | 0/8/10 | 2.134e−07 |
34 | 34:10784553 | G | A | 9/0/0 | 0/12/6 | 2.134e−07 |
34 | 34:10786591 | C | A | 9/0/0 | 0/12/6 | 2.134e−07 |
9 | 9:25213000 | T | C | 9/0/0 | 1/6/11 | 2.134e−06 |
9 | 9:26313263 | C | T | 9/0/0 | 1/6/11 | 2.134e−06 |
18 | 18:39450835 | G | A | 9/0/0 | 1/11/6 | 2.134e−06 |
9 | 9:24972813 | C | G | 9/0/0 | 1/7/10 | 4.267e−06 |
9 | 9:24974987 | G | A | 9/0/0 | 1/7/10 | 4.267e−06 |
9 | 9:24994921 | T | G | 9/0/0 | 1/7/10 | 4.267e−06 |
9 | 9:25040066 | G | C | 9/0/0 | 1/7/10 | 4.267e−06 |
9 | 9:25046429 | T | G | 9/0/0 | 1/10/7 | 4.267e−06 |
9 | 9:25049565 | G | A | 9/0/0 | 1/10/7 | 4.267e−06 |
9 | 9:26020165 | A | G | 9/0/0 | 1/10/7 | 4.267e−06 |
9 | 9:26398124 | C | T | 9/0/0 | 1/8/9 | 6.401e−06 |
18 | 18:39447278 | C | T | 9/0/0 | 1/9/8 | 6.401e−06 |
9 | 9:25373707 | C | T | 9/0/0 | 2/4/12 | 1.174e−05 |
4 | 4:27820959 | T | C | 9/0/0 | 2/10/6 | 1.387e−05 |
4 | 4:27831539 | T | C | 9/0/0 | 2/10/6 | 1.387e−05 |
4 | 4:27868268 | A | G | 9/0/0 | 2/10/6 | 1.387e−05 |
9 | 9:30966212 | C | T | 9/0/0 | 2/6/10 | 1.387e−05 |
34 | 34:10891254 | G | A | 9/0/0 | 2/10/6 | 1.387e−05 |
34 | 34:10893260 | A | C | 9/0/0 | 2/10/6 | 1.387e−05 |
9 | 9:19304983 | C | T | 9/0/0 | 2/8/8 | 1.984e−05 |
9 | 9:26289840 | A | G | 9/0/0 | 2/8/8 | 1.984e−05 |
32 | 32:10752374 | T | C | 9/0/0 | 2/8/8 | 1.984e−05 |
1 | 1:106899476 | A | G | 9/0/0 | 2/11/5 | 2.347e−05 |
9 | 9:25394028 | C | G | 9/0/0 | 2/11/5 | 2.347e−05 |
9 | 9:24966631 | C | G | 9/0/0 | 2/7/9 | 3.136e−05 |
9 | 9:25053412 | A | G | 9/0/0 | 2/9/7 | 3.136e−05 |
9 | 9:25065255 | T | C | 9/0/0 | 2/9/7 | 3.136e−05 |
9 | 9:25444400 | T | C | 9/0/0 | 2/7/9 | 3.136e−05 |
9 | 9:25493635 | A | G | 9/0/0 | 2/7/9 | 3.136e−05 |
34 | 34:10909969 | C | A | 9/0/0 | 2/9/7 | 3.136e−05 |
4 | 4:26209208 | C | T | 9/0/0 | 3/4/11 | 5.868e−05 |
6 | 6:28794412 | G | T | 9/0/0 | 3/11/4 | 5.868e−05 |
4 | 4:26426217 | A | G | 9/0/0 | 3/5/10 | 9.388e-05 |
6 | 6:28865921 | G | T | 9/0/0 | 3/12/3 | 9.388e−05 |
9 | 9:18958229 | G | A | 9/0/0 | 3/10/5 | 9.388e−05 |
9 | 9:19012795 | A | T | 9/0/0 | 3/10/5 | 9.388e−05 |
9 | 9:19023729 | T | G | 9/0/0 | 3/10/5 | 9.388e−05 |
9 | 9:19122430 | A | G | 9/0/0 | 3/10/5 | 9.388e−05 |
9 | 9:19123171 | T | G | 9/0/0 | 3/10/5 | 9.388e−05 |
9 | 9:24989017 | A | G | 9/0/0 | 3/10/5 | 9.388e−05 |
9 | 9:25380184 | A | C | 9/0/0 | 3/5/10 | 9.388e−05 |