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Table 1 A/Description of primary baits

From: A human skeletal muscle interactome centered on proteins involved in muscular dystrophies: LGMD interactome

Protein name

Protein symbol and LGMD form

Bait domain coordinates (aa)*

Bait domain description

calpain 3

CAPN3 (LGMD2A)

T417-S643

C2-like domain + exons15-16

 

M1-A822

full length protein with the C129S mutation in the autocatalytic site

dysferlin

DYSF (LGMD2B)

L2-I485

N-terminal DYSF regions containing the first three C2 domains

 

Q851-D1200

central DYSF domain

 

I1145-L2026

C-terminal DYSF domain containing the last four C2 domains and excluding the transmembrane span

γ- sarcoglycan

SGCG (LGMD2C)

M1-L36

cytoplasmic domain

α-sarcoglycan

SGCA (LGMD2D)

M313-H388

cytoplasmic domain

β-sarcoglycan

SGCB (LGMD2E)

E10-A65

cytoplasmic domain

δ-sarcoglycan

SGCD (LGMD2F)

E1-Y36

cytoplasmic domain

titin-cap (telethonin)

TCAP (LGMD2G)

M1-G167

full length protein

tripartite motif-containing 32

TRIM32 (LGMD2H)

L66-P654

full length protein minus the RING domain

titin

TTN (LGMD2J)

V97-K469

exons 4-8 from the Z-Disc region

I741-G948

exons 14-17 from the Z-Disc region

R2120-L2564

exons 28-33 from the Z-Disc region

A8831-E9158

exons 108-114 from the N2A-PEVK region

T32840-I33423

exons 358-363 from the Mline region

ankyrin repeat domain 1

ANKRD1

M1-F319

full length protein

ezrin

EZR

M1-S536

full length protein minus the actin-binding C-terminal domain

F-box protein 32 (MAFbx)

FBXO32

M1-F356

full length protein

tripartite motif-containing 63 (MuRF1)

TRIM63

M1-Q354

full length protein

  1. * amino acid coordinates refer to the translated products of the nucleotide sequences indicated in Additional file2: Table S2.