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Table 1 Sequences of primers used for quantitative PCR

From: The ERG1a potassium channel increases basal intracellular calcium concentration and calpain activity in skeletal muscle cells

Primer name (mouse)

Primer sequence 5′–3′

Size (bp)a

Tm (°C)

GC (%)

Amplicon size (bp)a

Merg1a forward

cctcgacaccatcatccgca

20

59.6

55.0

145

Merg1a reverse

aggaaatcgcaggtgcaggg

20

60.3

60.0

 

18S subunit forward

cgccgctagaggtgaaattct

21

57.2

52.4

101

18S subunit reverse

agaacgaaagtcggaggttc

20

57.0

52.4

 

Calpain 1 forward

gctaccgtttgtctagcgtc

20

58.73

55.0

98

Calpain 1 reverse

taactcctctgtcatcctctggt

23

59.99

47.83

 

Calpain 2 forward

ttttgtgcggtgtttggtcc

20

59.83

50.0

107

Calpain 2 reverse

aactcagccacgaagcaagg

20

60.89

55.0

 

Calpain 3 forward

ttcacaggaggggtgacaga

20

60.11

55.0

122

Calpain 3 reverse

ttcgtgccatcgtcaatggag

21

61.01

52.38

 

Calpastatin forward

gccttggatgacctgataga

20

53.8

50.0

115

Calpastatin reverse

gtgcctcaaggtaggtagaa

20

53.7

50.0

 
  1. abp base pair